open access publication

Article, Early Access, 2024

Transport-controlled growth decoupling for self-induced protein expression with a glycerol-repressible genetic circuit

BIOTECHNOLOGY AND BIOENGINEERING, ISSN 0006-3592, 0006-3592, 10.1002/bit.28697

Contributors

Lara, Alvaro 0000-0003-3535-7619 (Corresponding author) [1] Kunert, Flavio [2] Vandenbroucke, Vincent [3] Taymaz-Nikerel, Hilal [4] Martinez, Luz Maria [5] Sigala, Juan-Carlos 0000-0002-1665-5680 [6] Delvigne, Frank 0000-0002-1679-1914 [3] Gosset, Guillermo 0000-0003-3127-0911 [5] Buechs, Jochen [2]

Affiliations

  1. [1] Aarhus Univ, Dept Biol & Chem Engn, Aarhus, Denmark
  2. [NORA names: AU Aarhus University; University; Denmark; Europe, EU; Nordic; OECD];
  3. [2] Rhein Westfal TH Aachen, Biochem Engn AVT BioVT, Aachen, Germany
  4. [NORA names: Germany; Europe, EU; OECD];
  5. [3] Univ Liege, TERRA Res & Teaching Ctr, Microbial Proc & Interact MiPI, Gembloux Agrobio Tech, Gembloux, Belgium
  6. [NORA names: Belgium; Europe, EU; OECD];
  7. [4] Istanbul Bilgi Univ, Dept Genet & Bioengn, Istanbul, Turkiye
  8. [5] Univ Nacl Autonoma Mexico, Inst Biotecnol, Cuernavaca, Mexico
  9. [NORA names: Mexico; America, Central; OECD];

Abstract

Decoupling cell formation from recombinant protein synthesis is a potent strategy to intensify bioprocesses. Escherichia coli strains with mutations in the glucose uptake components lack catabolite repression, display low growth rate, no overflow metabolism, and high recombinant protein yields. Fast growth rates were promoted by the simultaneous consumption of glucose and glycerol, and this was followed by a phase of slow growth, when only glucose remained in the medium. A glycerol-repressible genetic circuit was designed to autonomously induce recombinant protein expression. The engineered strain bearing the genetic circuit was cultured in 3.9 g L-1 glycerol + 18 g L-1 glucose in microbioreactors with online oxygen transfer rate monitoring. The growth was fast during the simultaneous consumption of both carbon sources (C-sources), while expression of the recombinant protein was low. When glycerol was depleted, the growth rate decreased, and the specific fluorescence reached values 17% higher than those obtained with a strong constitutive promoter. Despite the relatively high amount of C-source used, no oxygen limitation was observed. The proposed approach eliminates the need for the substrate feeding or inducers addition and is set as a simple batch culture while mimicking fed-batch performance.

Keywords

C-source mixtures, bioprocess intensification, genetic circuit, growth decoupling, microbial engineering

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