Article, 2024

A novel computational pipeline for var gene expression augments the discovery of changes in the Plasmodium falciparum transcriptome during transition from in vivo to short-term in vitro culture

ELIFE, ISSN 2050-084X, Volume 12, 10.7554/eLife.87726

Contributors

Andradi-Brown, Clare [1] Wichers-Misterek, Jan Stephan [2] [3] [4] von Thien, Heidrun [2] [3] [4] Hoeppner, Yannick D. [2] [3] [4] Scholz, Judith A. M. [2] Hansson, Helle [5] Hocke, Emma Filtenborg [5] Gilberger, Tim Wolf [2] [3] [4] Duffy, Michael F. [6] Lavstsen, Thomas [5] Baum, Jake [1] [7] Otto, Thomas D. [8] Cunnington, Aubrey J. (Corresponding author) [1] Bachmann, Anna (Corresponding author) [2] [3] [4] [9]

Affiliations

  1. [1] Imperial Coll London, Ctr Paediat & Child Hlth, London, England
    2. [NORA names: United Kingdom; Europe, Non-EU; OECD];
  2. [2] Bernhard Nocht Inst Trop Med, Bernhard Nocht Str, Hamburg, Germany
    3. [NORA names: Germany; Europe, EU; OECD];
  3. [3] Ctr Struct Syst Biol, Hamburg, Germany
    4. [NORA names: Germany; Europe, EU; OECD];
  4. [4] Univ Hamburg, Biol Dept, Hamburg, Germany
    5. [NORA names: Germany; Europe, EU; OECD];
  5. [5] Copenhagen Univ Hosp, Dept Infect Dis, Copenhagen, Denmark
    6. [NORA names: KU University of Copenhagen; University; Denmark; Europe, EU; Nordic; OECD];

Abstract

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Keywords

P. falciparum, RNA sequencing, de novo assembly, gene expression, malaria, virulence

Data Provider: Clarivate

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